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genotoul-bioinfo
metagWGS
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Milestone
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%V2.1 Tests fonctionnels
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Manual
Title
Issue
process download_taxonomy_db: taxdump and prot_accession2taxid
#120
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Enhancement
Closed
closed 4 years ago
Issue
[WIP] Functional Tests (Pierre)
76 of 76 checklist items completed
#144
·
created
3 years ago
by
MARTIN Pierre
V2.1 Tests fonctionnels
Discussion
Todo
Closed
closed 3 years ago
Issue
Test parameter --host_bwa_index
#73
·
created
4 years ago
by
Celine Noirot
V2.1 Tests fonctionnels
Todo
Closed
closed 4 years ago
Issue
Rerun of prokka
#131
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Closed
closed 4 years ago
Issue
07_taxo_affi: taxon_id in output files
#123
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Enhancement
Closed
closed 4 years ago
Issue
MultiQC: manage modularity
#129
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Bug
Closed
closed 4 years ago
Issue
multiQC: results affi taxo genes and contigs?
#105
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Enhancement
Closed
closed 4 years ago
Issue
Table with nb prot before and after clustering by sample
#41
·
created
5 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Enhancement
Closed
closed 4 years ago
Issue
Quast after prokka ?
#78
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Closed
closed 4 years ago
Issue
Kaiju process: add graphs of number of reads by taxonomy level
#43
·
created
5 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Enhancement
Closed
closed 4 years ago
Issue
MultiQC html file configuration name files
#128
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Bug
Closed
closed 4 years ago
Issue
Allow depth computation on taxonomic affiliation
#137
·
created
4 years ago
by
Claire Hoede
V2.1 Tests fonctionnels
Bug
Closed
closed 3 years ago
Issue
multiQC: improve prokka module?
#103
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Enhancement
Closed
closed 4 years ago
Issue
multiQC: cd-hit?
#104
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Enhancement
Closed
closed 4 years ago
Issue
Keep in mind: error into process 'download_taxonomy_db'
#122
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Bug
Closed
closed 4 years ago
Issue
Keep casava option into fastqc after filter of host reads ?
#61
·
created
4 years ago
by
Joanna Fourquet
V2.1 Tests fonctionnels
Discussion
Closed
closed 4 years ago
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