diff --git a/modules/local/module_core.nf b/modules/local/module_core.nf index 35bd8682f6c5f43a5bdd422ce64d6229f92a35cc..7db960a903b2ec01bb454d21e68d9728b11dc8d4 100644 --- a/modules/local/module_core.nf +++ b/modules/local/module_core.nf @@ -124,7 +124,7 @@ process MERGE_LANES { tuple val(sample), path(reads) output: - tuple val(sample), path("*.fastq.gz"), emit: fastq + tuple val(sample), path("*.fastq"), emit: fastq script: def args = task.ext.args ?: ''